According the SWAC website, JSU led the series 10-5 before the 2005 contest in which AAMU won. Therfore JSU leads the series 10-6.
Of the records I have in front of me right now (which only go back to 1950), JSU beat AAMU in:
1950 12-6
1951 7-6
1952 27-12
1953 20-0
There is obviously one more JSU whoopin somewhere. JSU and AAMU probably split the 1948 and 1949 series before AAMU realized by 1953 that they were out of their league.
In the modern era,
AAMU beat us in 1995 (by one point) and then again in the Bell era...03, 04, and 05.
We beat them in 1994, then resumed the azz whoopin's in 99, 00, 01, and 02